Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup98Q6PFD9 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup98Q6PFD9 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.4□□□□□ -1.06
Nup98Q6PFD9 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Nup98Q6PFD9 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Nup98Q6PFD9 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Gm16073-201ENSMUST00000116032 517 ntBASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 AC138765.3-201ENSMUST00000227981 423 ntBASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Nup98Q6PFD9 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm11609-201ENSMUST00000121926 793 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm9504-201ENSMUST00000196322 468 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm42708-201ENSMUST00000196332 905 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm42673-201ENSMUST00000202676 337 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 CT009738.1-201ENSMUST00000219031 809 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 AW822073-201ENSMUST00000075305 555 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Mir106b-201ENSMUST00000083580 82 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 AC159196.3-201ENSMUST00000224307 1841 ntBASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Plec-207ENSMUST00000076442 15439 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Nup98Q6PFD9 Pik3ca-203ENSMUST00000108243 6689 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm12439-201ENSMUST00000117162 365 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm14863-201ENSMUST00000119648 307 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm25435-201ENSMUST00000158277 267 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm43212-201ENSMUST00000198208 394 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm46231-201ENSMUST00000220152 314 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm5928-201ENSMUST00000221839 466 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 AC165260.6-205ENSMUST00000224190 9762 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm37984-201ENSMUST00000191641 3733 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Tecpr2-201ENSMUST00000165978 7778 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm12242-201ENSMUST00000118824 738 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm6451-201ENSMUST00000121488 717 ntBASIC8.38□□□□□ -1.07
Nup98Q6PFD9 Gm12754-201ENSMUST00000121908 454 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms