Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm25083-201ENSMUST00000102319 92 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm13798-201ENSMUST00000118285 139 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm12321-201ENSMUST00000121485 804 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm37669-201ENSMUST00000192184 820 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm42573-201ENSMUST00000202327 478 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm43812-202ENSMUST00000202701 581 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm44971-201ENSMUST00000206192 337 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm9240-201ENSMUST00000206527 742 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Snora21-201ENSMUST00000082967 137 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.22□□□□□ -1.09
Ctdnep1Q3TP92 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Ctdnep1Q3TP92 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ctdnep1Q3TP92 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ctdnep1Q3TP92 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ctdnep1Q3TP92 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Ctdnep1Q3TP92 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
Ctdnep1Q3TP92 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm12740-201ENSMUST00000118794 308 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm15188-201ENSMUST00000121264 704 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm23222-201ENSMUST00000158117 76 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm4373-201ENSMUST00000178571 556 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm29354-201ENSMUST00000187613 696 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm45888-201ENSMUST00000212348 1229 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 AC102582.1-201ENSMUST00000215376 378 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 AC139941.1-201ENSMUST00000221517 478 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Onecut2-201ENSMUST00000115145 13389 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm37321-201ENSMUST00000195742 1872 ntBASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Ctdnep1Q3TP92 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 AC158115.1-201ENSMUST00000222830 3182 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm10259-201ENSMUST00000091289 1590 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm14201-201ENSMUST00000117627 289 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm13137-201ENSMUST00000118035 345 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm25277-201ENSMUST00000157266 324 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Gm22035-201ENSMUST00000157284 228 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 n-R5s93-201ENSMUST00000180091 119 ntBASIC8.2□□□□□ -1.1
Ctdnep1Q3TP92 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms