Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm24576-201ENSMUST00000175508 248 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm5147-201ENSMUST00000185999 794 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm29195-201ENSMUST00000189038 379 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm9723-201ENSMUST00000192100 457 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm5154-201ENSMUST00000203971 399 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm18562-201ENSMUST00000209949 915 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Trim43aQ3TL54 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.65□□□□□ -1.19
Trim43aQ3TL54 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Trim43aQ3TL54 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.65□□□□□ -1.19
Trim43aQ3TL54 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
Trim43aQ3TL54 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm44121-201ENSMUST00000205169 2006 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm16407-201ENSMUST00000122134 567 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm23222-201ENSMUST00000158117 76 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm27542-201ENSMUST00000184184 256 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm18349-201ENSMUST00000187440 904 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm28341-201ENSMUST00000190883 472 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm38203-201ENSMUST00000191815 245 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm42965-201ENSMUST00000201254 250 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm34583-203ENSMUST00000202586 454 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm25852-201ENSMUST00000082790 130 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm24924-201ENSMUST00000084007 164 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 AC158605.3-201ENSMUST00000218999 2538 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Dram2-203ENSMUST00000121034 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Trim43aQ3TL54 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gm25725-201ENSMUST00000104528 130 ntBASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gm11558-201ENSMUST00000118454 459 ntBASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gm24738-201ENSMUST00000158856 123 ntBASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gm7707-201ENSMUST00000165950 1156 ntBASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
Trim43aQ3TL54 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.63□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms