Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cntn3Q07409 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Cntn3Q07409 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm44667-201ENSMUST00000207632 3337 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm6746-201ENSMUST00000108774 483 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm14098-201ENSMUST00000119295 623 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm14554-201ENSMUST00000119548 661 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm12773-201ENSMUST00000120134 587 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm12692-201ENSMUST00000121092 546 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC8.15□□□□□ -1.1
Cntn3Q07409 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm26182-201ENSMUST00000157688 116 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm5698-201ENSMUST00000178317 724 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Mir8095-201ENSMUST00000185103 129 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.15□□□□□ -1.1
Cntn3Q07409 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC8.15□□□□□ -1.1
Cntn3Q07409 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 AC154484.1-201ENSMUST00000227311 771 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 AC124103.1-201ENSMUST00000227564 1027 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 AC154692.1-201ENSMUST00000228314 544 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Snora9-201ENSMUST00000082579 133 ntBASIC8.15□□□□□ -1.1
Cntn3Q07409 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Cntn3Q07409 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Cntn3Q07409 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cntn3Q07409 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cntn3Q07409 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
Cntn3Q07409 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Cntn3Q07409 Gm14802-201ENSMUST00000121944 1885 ntBASIC8.15□□□□□ -1.11
Cntn3Q07409 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Cntn3Q07409 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
Cntn3Q07409 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Cntn3Q07409 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cntn3Q07409 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Cntn3Q07409 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm42656-201ENSMUST00000201506 2305 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm43319-201ENSMUST00000198036 2270 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 AC061963.2-201ENSMUST00000213541 2739 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm42942-201ENSMUST00000196086 1328 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cntn3Q07409 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm23484-201ENSMUST00000104178 131 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm23834-201ENSMUST00000104436 129 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Cntn3Q07409 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm15578-201ENSMUST00000117320 475 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm13858-201ENSMUST00000118862 671 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm13252-201ENSMUST00000119355 321 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm13224-201ENSMUST00000119586 94 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm12262-201ENSMUST00000119915 305 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm8051-201ENSMUST00000120464 466 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm5125-201ENSMUST00000148614 624 ntBASIC8.14□□□□□ -1.11
Cntn3Q07409 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms