Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm23054-201ENSMUST00000082804 162 ntBASIC6.67□□□□□ -1.34
Col8a1Q00780 Serinc4-201ENSMUST00000056312 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Col8a1Q00780 Gm36952-201ENSMUST00000194923 3625 ntBASIC6.67□□□□□ -1.34
Col8a1Q00780 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Col8a1Q00780 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.67□□□□□ -1.34
Col8a1Q00780 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Col8a1Q00780 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Gm37077-201ENSMUST00000195723 3691 ntBASIC6.67□□□□□ -1.34
Col8a1Q00780 AC171003.1-201ENSMUST00000221667 1665 ntBASIC6.67□□□□□ -1.34
Col8a1Q00780 Fgg-201ENSMUST00000048486 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.67□□□□□ -1.34
Col8a1Q00780 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC6.67□□□□□ -1.34
Col8a1Q00780 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
Col8a1Q00780 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Gm37151-201ENSMUST00000194631 5007 ntBASIC6.67□□□□□ -1.34
Col8a1Q00780 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Col8a1Q00780 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm43686-201ENSMUST00000197351 2439 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm25614-201ENSMUST00000104013 133 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm26016-201ENSMUST00000104403 129 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm22032-201ENSMUST00000116946 116 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm14375-201ENSMUST00000119490 855 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm17061-201ENSMUST00000163167 499 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm20530-201ENSMUST00000174261 254 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm25574-201ENSMUST00000175245 249 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm7481-201ENSMUST00000182020 995 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm21542-201ENSMUST00000182307 993 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm26929-201ENSMUST00000182703 753 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Mir6244-201ENSMUST00000184156 117 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm27542-201ENSMUST00000184184 256 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm27715-201ENSMUST00000184714 260 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.66□□□□□ -1.34
Col8a1Q00780 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm45198-201ENSMUST00000206796 591 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 AC147639.1-201ENSMUST00000224216 661 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Casc1-201ENSMUST00000060797 2572 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Acvr1-204ENSMUST00000112601 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Trim21-201ENSMUST00000033264 2793 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Sox6-203ENSMUST00000166207 2825 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Gm43618-201ENSMUST00000197392 3451 ntBASIC6.66□□□□□ -1.34
Col8a1Q00780 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Col8a1Q00780 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Col8a1Q00780 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms