Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm16421-201ENSMUST00000117616 1557 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Trp63-201ENSMUST00000040231 4703 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Ttc39c-204ENSMUST00000169401 1950 ntAPPRIS ALT1 TSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Tmx2-201ENSMUST00000053664 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Il1rl2-201ENSMUST00000095020 1950 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm33111-202ENSMUST00000219954 3388 ntTSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 Gas8-203ENSMUST00000212923 3469 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Eya3-201ENSMUST00000020197 4976 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm36930-201ENSMUST00000195431 2376 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Sox1P53783 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Sox1P53783 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm23903-201ENSMUST00000157566 131 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm21756-201ENSMUST00000178380 930 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm5973-201ENSMUST00000178542 496 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm21405-201ENSMUST00000179024 930 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm8266-201ENSMUST00000179745 1192 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm27033-201ENSMUST00000183226 544 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Mir7072-201ENSMUST00000184542 60 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm21191-201ENSMUST00000186484 930 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Gm29503-201ENSMUST00000191044 930 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC8.04□□□□□ -1.12
Sox1P53783 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm44075-201ENSMUST00000204208 216 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm4259-201ENSMUST00000206489 758 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm18597-201ENSMUST00000209519 694 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.04□□□□□ -1.12
Sox1P53783 AC154184.2-201ENSMUST00000225335 349 ntBASIC8.04□□□□□ -1.12
Sox1P53783 AC102815.1-201ENSMUST00000226662 1061 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Cma2-202ENSMUST00000228263 857 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Rnf19a-203ENSMUST00000228358 3452 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Bcas1-201ENSMUST00000013667 2916 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 Cd99l2-201ENSMUST00000037391 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Gm44624-201ENSMUST00000208700 2278 ntBASIC8.04□□□□□ -1.12
Sox1P53783 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC8.04□□□□□ -1.12
Sox1P53783 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Sox1P53783 AC132392.1-202ENSMUST00000216652 2681 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
Sox1P53783 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Sox1P53783 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm13571-202ENSMUST00000151984 2127 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm45746-201ENSMUST00000212623 2447 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Ovol1-201ENSMUST00000025861 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm43657-201ENSMUST00000200336 3833 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Cldn34c1-202ENSMUST00000113348 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm26703-202ENSMUST00000181506 2982 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Sox1P53783 Gm45280-201ENSMUST00000210484 2552 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Olfr641-202ENSMUST00000213214 2379 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Sox1P53783 Gm42497-201ENSMUST00000197363 1958 ntBASIC8.03□□□□□ -1.12
Sox1P53783 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms