Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC9.06□□□□□ -0.96
Rfx1P48377 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC9.06□□□□□ -0.96
Rfx1P48377 Atp2b4-208ENSMUST00000167348 243 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm24824-201ENSMUST00000175097 78 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm25190-201ENSMUST00000176664 95 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm28803-201ENSMUST00000190385 764 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm42952-203ENSMUST00000197784 798 ntTSL 3 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC9.06□□□□□ -0.96
Rfx1P48377 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC9.06□□□□□ -0.96
Rfx1P48377 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm16273-201ENSMUST00000202238 268 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm44743-201ENSMUST00000209062 386 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm45269-201ENSMUST00000210359 282 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 AL929265.1-201ENSMUST00000213427 125 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 AC153561.1-201ENSMUST00000215943 469 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 AC151971.2-201ENSMUST00000217540 909 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 AC130829.2-201ENSMUST00000222931 127 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 AC139323.1-201ENSMUST00000223370 1040 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 CT025579.4-201ENSMUST00000224598 627 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 CT009550.3-201ENSMUST00000228542 455 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Rfx1P48377 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Rfx1P48377 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Rfx1P48377 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm6866-201ENSMUST00000188559 2549 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm43398-201ENSMUST00000196584 2742 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Rfx1P48377 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Rfx1P48377 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm43873-201ENSMUST00000204505 3938 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Rfx1P48377 Gm37618-201ENSMUST00000192891 3075 ntBASIC9.06□□□□□ -0.96
Rfx1P48377 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm45088-201ENSMUST00000207066 1408 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm6729-201ENSMUST00000165173 1452 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm12838-201ENSMUST00000116278 325 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm12072-201ENSMUST00000118293 715 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Rfx1P48377 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC9.05□□□□□ -0.96
Rfx1P48377 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm9423-201ENSMUST00000183173 997 ntBASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Rfx1P48377 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms