Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm22687-201ENSMUST00000158301 105 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm4781-201ENSMUST00000167995 781 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm43542-201ENSMUST00000199505 379 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm42965-201ENSMUST00000201254 250 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm5723-201ENSMUST00000203096 432 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm4972-201ENSMUST00000211108 1254 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Gm7151-201ENSMUST00000211511 954 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 AC134414.1-201ENSMUST00000228499 1221 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox6P40645 Gm6807-201ENSMUST00000077435 888 ntBASIC6.78□□□□□ -1.32
Sox6P40645 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Sox6P40645 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.78□□□□□ -1.32
Sox6P40645 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Sox6P40645 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Sox6P40645 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Sox6P40645 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Sox6P40645 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Sox6P40645 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Sox6P40645 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox6P40645 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm14016-201ENSMUST00000119095 486 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm14156-201ENSMUST00000121538 483 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm7436-201ENSMUST00000187229 391 ntBASIC6.77□□□□□ -1.33
Sox6P40645 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.77□□□□□ -1.33
Sox6P40645 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Gm37689-201ENSMUST00000193139 275 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC6.77□□□□□ -1.33
Sox6P40645 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.77□□□□□ -1.33
Sox6P40645 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Sox6P40645 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Gm43395-201ENSMUST00000198717 2240 ntBASIC6.77□□□□□ -1.33
Sox6P40645 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Sox6P40645 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.77□□□□□ -1.33
Sox6P40645 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Sox6P40645 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.77□□□□□ -1.33
Sox6P40645 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.76□□□□□ -1.33
Sox6P40645 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.76□□□□□ -1.33
Sox6P40645 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
Sox6P40645 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Sox6P40645 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms