Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col2a1P28481 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Gm8822-201ENSMUST00000118948 2347 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Col2a1P28481 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC8.17□□□□□ -1.1
Col2a1P28481 C78859-201ENSMUST00000212800 5943 ntBASIC8.17□□□□□ -1.1
Col2a1P28481 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Col2a1P28481 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col2a1P28481 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Col2a1P28481 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm14865-201ENSMUST00000117523 494 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm12573-201ENSMUST00000118158 286 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm14863-201ENSMUST00000119648 307 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm13237-201ENSMUST00000122151 635 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC8.16□□□□□ -1.1
Col2a1P28481 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm46379-201ENSMUST00000222551 265 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9267-201ENSMUST00000222831 404 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Col2a1P28481 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9874-202ENSMUST00000194957 1464 ntBASIC8.16□□□□□ -1.1
Col2a1P28481 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Col2a1P28481 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Col2a1P28481 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Col2a1P28481 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Col2a1P28481 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Col2a1P28481 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Snord88a-201ENSMUST00000116723 90 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm14466-201ENSMUST00000119028 451 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm15311-201ENSMUST00000119682 282 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm15305-201ENSMUST00000120354 288 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm6451-201ENSMUST00000121488 717 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm12929-201ENSMUST00000122406 370 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm7613-201ENSMUST00000139070 487 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Gm37620-201ENSMUST00000192910 501 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC8.15□□□□□ -1.1
Col2a1P28481 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC8.15□□□□□ -1.1
Col2a1P28481 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.15□□□□□ -1.1
Col2a1P28481 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC8.15□□□□□ -1.1
Col2a1P28481 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Col2a1P28481 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Mettl14-202ENSMUST00000090371 7197 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col2a1P28481 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms