Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm14550-201ENSMUST00000117918 407 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm13930-201ENSMUST00000118569 368 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm15989-201ENSMUST00000121895 498 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC5.77□□□□□ -1.49
Sdc1P18828 H2afy3-201ENSMUST00000151919 1112 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm19815-201ENSMUST00000175818 335 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm6061-201ENSMUST00000175860 492 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Krtap22-2-201ENSMUST00000178913 380 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sdc1P18828 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm29485-201ENSMUST00000190220 282 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm38337-201ENSMUST00000193986 599 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm42779-201ENSMUST00000198807 406 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm16273-201ENSMUST00000202238 268 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm42964-201ENSMUST00000202965 382 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm4259-201ENSMUST00000206489 758 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC5.77□□□□□ -1.49
Sdc1P18828 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm45925-202ENSMUST00000219904 1136 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.77□□□□□ -1.49
Sdc1P18828 AC140288.1-201ENSMUST00000226329 503 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 AC154760.1-201ENSMUST00000227218 673 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Sdc1P18828 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.77□□□□□ -1.49
Sdc1P18828 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sdc1P18828 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Sdc1P18828 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm11241-201ENSMUST00000117371 896 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm14893-201ENSMUST00000117904 282 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm23657-201ENSMUST00000122623 294 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm6799-201ENSMUST00000186919 573 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm28115-201ENSMUST00000188985 360 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm28413-201ENSMUST00000189369 291 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Tmigd3-204ENSMUST00000198080 832 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm4536-201ENSMUST00000209157 542 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 AC159188.3-201ENSMUST00000224199 880 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 AC134414.1-201ENSMUST00000228499 1221 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm2840-201ENSMUST00000048361 411 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sdc1P18828 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sdc1P18828 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Mir341-201ENSMUST00000093593 96 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sdc1P18828 Gm38195-201ENSMUST00000194247 1499 ntBASIC5.76□□□□□ -1.49
Sdc1P18828 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms