Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.05
Col1a1P11087 Pcdh15-236ENSMUST00000193174 5936 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Col1a1P11087 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
Col1a1P11087 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm22374-201ENSMUST00000104583 132 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm15242-201ENSMUST00000122459 283 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC8.46□□□□□ -1.05
Col1a1P11087 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 Gm44538-201ENSMUST00000205615 348 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm34424-201ENSMUST00000213400 782 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 AC154642.1-201ENSMUST00000224173 740 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 AC125405.2-201ENSMUST00000227862 383 ntBASIC8.46□□□□□ -1.05
Col1a1P11087 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Col1a1P11087 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Col1a1P11087 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Col1a1P11087 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC8.46□□□□□ -1.06
Col1a1P11087 Entpd5-201ENSMUST00000021662 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Col1a1P11087 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
Col1a1P11087 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Col1a1P11087 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Col1a1P11087 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm4992-201ENSMUST00000120256 768 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm12540-201ENSMUST00000121938 319 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm20454-201ENSMUST00000172713 221 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Mir3078-201ENSMUST00000175231 87 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm19088-201ENSMUST00000198800 566 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm43762-201ENSMUST00000201521 295 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm43748-201ENSMUST00000202329 1233 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.45□□□□□ -1.06
Col1a1P11087 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col1a1P11087 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm37161-201ENSMUST00000191994 2697 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 AC107763.1-202ENSMUST00000225021 2663 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm23979-201ENSMUST00000104071 128 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm11920-201ENSMUST00000118491 563 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm24286-201ENSMUST00000157632 128 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm22990-201ENSMUST00000175427 89 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Mir3473g-201ENSMUST00000183494 136 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm45485-201ENSMUST00000211229 357 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.45□□□□□ -1.06
Col1a1P11087 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC8.45□□□□□ -1.06
Col1a1P11087 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Col1a1P11087 Mir3068-201ENSMUST00000083004 136 ntBASIC8.45□□□□□ -1.06
Col1a1P11087 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Col1a1P11087 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC8.44□□□□□ -1.06
Col1a1P11087 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Col1a1P11087 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.44□□□□□ -1.06
Col1a1P11087 C78859-201ENSMUST00000212800 5943 ntBASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms