Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm20928-201ENSMUST00000192992 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm20851-201ENSMUST00000193038 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm37476-201ENSMUST00000193046 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21678-201ENSMUST00000193567 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21768-201ENSMUST00000194103 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm20836-201ENSMUST00000194582 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm21660-201ENSMUST00000195789 696 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm43345-201ENSMUST00000199484 269 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm42441-201ENSMUST00000199778 748 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm18118-201ENSMUST00000201064 645 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm43461-201ENSMUST00000202351 996 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm45343-201ENSMUST00000210452 828 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm19196-202ENSMUST00000210709 321 ntTSL 2 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm19196-203ENSMUST00000211164 363 ntTSL 2 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Olfr925-ps1-201ENSMUST00000217295 780 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm46364-201ENSMUST00000218548 319 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm4052-201ENSMUST00000220890 451 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm18114-201ENSMUST00000221780 523 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm18940-201ENSMUST00000222518 871 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Taf1b-203ENSMUST00000222710 521 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 AC154576.2-203ENSMUST00000224736 253 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 AC134577.2-201ENSMUST00000228541 715 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Ccl17-201ENSMUST00000034232 514 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm5436-201ENSMUST00000058103 643 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm22422-201ENSMUST00000083060 135 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Olfr549-201ENSMUST00000098227 951 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm45718-201ENSMUST00000207577 3794 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Prpf40a-208ENSMUST00000210789 3773 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 9330158H04Rik-208ENSMUST00000161820 2324 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Col15a1-204ENSMUST00000107731 3253 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gramd1c-202ENSMUST00000114677 3271 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Ttc17-204ENSMUST00000111238 4590 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 AC121860.1-201ENSMUST00000227908 2787 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC6.78□□□□□ -1.32
Hoxd3P09027 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Hmgcr-209ENSMUST00000170287 2981 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm4915-201ENSMUST00000121909 1569 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Olfm5-201ENSMUST00000051137 2268 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Bmf-202ENSMUST00000110859 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Hoxd3P09027 Gm44154-201ENSMUST00000204559 2724 ntBASIC6.78□□□□□ -1.32
Hoxd3P09027 Adh6a-201ENSMUST00000013455 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Hoxd3P09027 4933431E20Rik-210ENSMUST00000152663 2358 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Hoxd3P09027 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Hoxd3P09027 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.77□□□□□ -1.32
Hoxd3P09027 Anxa10-201ENSMUST00000034052 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm28447-202ENSMUST00000186677 2230 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm15169-202ENSMUST00000130794 2335 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Serpinb6a-202ENSMUST00000043552 1547 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm7435-202ENSMUST00000216003 2424 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Tll2-202ENSMUST00000169941 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Cblb-206ENSMUST00000227879 3866 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Cyp2d37-ps-201ENSMUST00000100380 590 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Igkv2-112-202ENSMUST00000103319 358 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm22661-201ENSMUST00000104192 132 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm8087-201ENSMUST00000119091 567 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm14855-201ENSMUST00000119925 192 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm11533-201ENSMUST00000120287 477 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm13743-201ENSMUST00000121486 724 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Gm14589-201ENSMUST00000121640 727 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Hoxd3P09027 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.77□□□□□ -1.33
Hoxd3P09027 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC6.77□□□□□ -1.33
Hoxd3P09027 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms