Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.54□□□□□ -1.04
Hoxb3P09026 Gm10824-201ENSMUST00000220000 2198 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxb3P09026 AC154176.2-201ENSMUST00000225376 6429 ntBASIC8.54□□□□□ -1.04
Hoxb3P09026 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Synj2-207ENSMUST00000115788 3498 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Ugt2b36-201ENSMUST00000094649 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Vmn1r21-201ENSMUST00000203310 1779 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 AC122402.1-201ENSMUST00000225199 2303 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Tle3-208ENSMUST00000160882 3523 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Sprr2a2-201ENSMUST00000071805 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Ube2k-205ENSMUST00000201383 1553 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm44284-201ENSMUST00000203836 3444 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm5442-201ENSMUST00000202121 2034 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Tigar-201ENSMUST00000039913 3651 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Ubqln3-201ENSMUST00000057254 2376 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm25167-201ENSMUST00000104188 120 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Rpl36-ps1-201ENSMUST00000119508 303 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm14855-201ENSMUST00000119925 192 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm11876-201ENSMUST00000120002 269 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm23212-201ENSMUST00000122718 60 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm22452-201ENSMUST00000122804 104 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC8.53□□□□□ -1.04
Hoxb3P09026 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm23981-201ENSMUST00000157136 106 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm24738-201ENSMUST00000158856 123 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm21638-201ENSMUST00000179473 836 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm16531-201ENSMUST00000180658 967 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm1972-201ENSMUST00000181606 964 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm27013-201ENSMUST00000182441 1024 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm28894-201ENSMUST00000185214 615 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm38075-201ENSMUST00000191979 920 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm37369-201ENSMUST00000194179 615 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm18702-201ENSMUST00000196923 588 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Igkv12-47-201ENSMUST00000196961 356 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm43247-201ENSMUST00000198638 481 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm44142-201ENSMUST00000203358 311 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm31861-201ENSMUST00000204563 672 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm44743-201ENSMUST00000209062 386 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm19219-201ENSMUST00000215863 724 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm32220-201ENSMUST00000218420 298 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm36208-201ENSMUST00000220013 429 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 8030411F24Rik-201ENSMUST00000028933 602 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Olfr1143-201ENSMUST00000090708 945 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Hoxb3P09026 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Timeless-206ENSMUST00000105245 4402 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm5743-202ENSMUST00000212004 1647 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm16206-201ENSMUST00000132485 1966 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm26520-201ENSMUST00000180719 1423 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm40999-201ENSMUST00000222586 3387 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 AC113125.1-201ENSMUST00000226852 1774 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Gm42444-201ENSMUST00000199366 4558 ntBASIC8.53□□□□□ -1.04
Hoxb3P09026 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxb3P09026 Trim39-201ENSMUST00000042717 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Hoxb3P09026 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC8.52□□□□□ -1.04
Hoxb3P09026 Adam9-201ENSMUST00000084032 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Hoxb3P09026 Ctse-202ENSMUST00000112411 1837 ntTSL 5 BASIC8.52□□□□□ -1.04
Hoxb3P09026 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxb3P09026 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxb3P09026 Gm43498-201ENSMUST00000202002 1486 ntBASIC8.52□□□□□ -1.05
Hoxb3P09026 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms