Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.47□□□□□ -1.37
P06344 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P06344 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.47□□□□□ -1.37
P06344 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Gm43099-201ENSMUST00000198943 5241 ntBASIC6.47□□□□□ -1.37
P06344 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.47□□□□□ -1.37
P06344 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.47□□□□□ -1.37
P06344 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P06344 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P06344 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
P06344 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
P06344 Gm15422-201ENSMUST00000117453 541 ntBASIC6.47□□□□□ -1.37
P06344 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.47□□□□□ -1.37
P06344 Gm5255-201ENSMUST00000120125 642 ntBASIC6.47□□□□□ -1.37
P06344 Gm2735-201ENSMUST00000136133 277 ntBASIC6.47□□□□□ -1.37
P06344 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC6.47□□□□□ -1.37
P06344 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.47□□□□□ -1.37
P06344 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
P06344 Gm7651-201ENSMUST00000173398 901 ntBASIC6.47□□□□□ -1.37
P06344 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Gm18848-201ENSMUST00000182069 792 ntBASIC6.47□□□□□ -1.37
P06344 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.47□□□□□ -1.37
P06344 Gm5305-201ENSMUST00000204010 746 ntBASIC6.47□□□□□ -1.37
P06344 Gm44258-201ENSMUST00000204925 301 ntBASIC6.47□□□□□ -1.37
P06344 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Gm45042-201ENSMUST00000207377 211 ntBASIC6.47□□□□□ -1.37
P06344 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Gm45432-201ENSMUST00000210391 416 ntBASIC6.47□□□□□ -1.37
P06344 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
P06344 CT030166.4-201ENSMUST00000220640 404 ntBASIC6.47□□□□□ -1.37
P06344 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.47□□□□□ -1.37
P06344 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Mir455-201ENSMUST00000093594 82 ntBASIC6.47□□□□□ -1.37
P06344 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Rnf24-204ENSMUST00000165420 5833 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
P06344 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
P06344 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.47□□□□□ -1.37
P06344 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
P06344 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P06344 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
P06344 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
P06344 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.46□□□□□ -1.37
P06344 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
P06344 Gm37161-201ENSMUST00000191994 2697 ntBASIC6.46□□□□□ -1.37
P06344 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC6.46□□□□□ -1.37
P06344 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.46□□□□□ -1.37
P06344 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
P06344 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.46□□□□□ -1.37
P06344 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
P06344 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC6.46□□□□□ -1.37
P06344 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
P06344 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC6.46□□□□□ -1.38
P06344 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P06344 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
P06344 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.46□□□□□ -1.38
P06344 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
P06344 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
P06344 Gm17170-201ENSMUST00000112785 316 ntBASIC6.46□□□□□ -1.38
P06344 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P06344 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.46□□□□□ -1.38
P06344 Gm15484-201ENSMUST00000118871 828 ntBASIC6.46□□□□□ -1.38
P06344 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC6.46□□□□□ -1.38
P06344 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.46□□□□□ -1.38
P06344 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC6.46□□□□□ -1.38
P06344 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC6.46□□□□□ -1.38
P06344 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
P06344 Gm7420-201ENSMUST00000162836 842 ntBASIC6.46□□□□□ -1.38
P06344 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
P06344 Mir7058-201ENSMUST00000184637 75 ntBASIC6.46□□□□□ -1.38
P06344 Gm28416-201ENSMUST00000188334 292 ntBASIC6.46□□□□□ -1.38
P06344 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.46□□□□□ -1.38
P06344 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.46□□□□□ -1.38
P06344 Gm20136-201ENSMUST00000207501 891 ntBASIC6.46□□□□□ -1.38
P06344 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
P06344 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
P06344 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.46□□□□□ -1.38
P06344 Gm19217-201ENSMUST00000218238 328 ntBASIC6.46□□□□□ -1.38
P06344 Gm7986-201ENSMUST00000221336 551 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms