Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 AC132587.1-201ENSMUST00000220562 166 ntBASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm2754-201ENSMUST00000223383 589 ntBASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 AC133203.1-201ENSMUST00000228241 301 ntBASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
B020004C17RikJ3QP07 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 AC101875.1-201ENSMUST00000222666 2223 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm15422-201ENSMUST00000117453 541 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm14847-201ENSMUST00000121978 519 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm3344-201ENSMUST00000169610 603 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm4860-201ENSMUST00000200368 454 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm44896-201ENSMUST00000206190 772 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm2975-201ENSMUST00000209710 820 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 AC151904.2-201ENSMUST00000218683 1177 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm9267-201ENSMUST00000222831 404 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 AC159205.7-201ENSMUST00000225988 692 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm26226-201ENSMUST00000082509 116 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
B020004C17RikJ3QP07 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.27□□□□□ -1.08
B020004C17RikJ3QP07 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
B020004C17RikJ3QP07 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 AC120347.2-201ENSMUST00000222224 2015 ntBASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Gm44883-201ENSMUST00000206063 3258 ntBASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.27□□□□□ -1.09
B020004C17RikJ3QP07 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms