Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Trim3Q9R1R2 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm7562-201ENSMUST00000210502 2537 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm23323-201ENSMUST00000104471 133 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm28894-201ENSMUST00000185214 615 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm28164-201ENSMUST00000190143 442 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm37369-201ENSMUST00000194179 615 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm20690-202ENSMUST00000195126 355 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm2287-201ENSMUST00000197417 1084 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 AC160338.3-201ENSMUST00000214836 384 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 CT010472.1-201ENSMUST00000224000 704 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 AC166822.1-201ENSMUST00000227667 636 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 AC154838.3-201ENSMUST00000228876 965 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm5250-201ENSMUST00000059065 321 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Trim3Q9R1R2 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.87□□□□□ -1.31
Trim3Q9R1R2 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm13038-201ENSMUST00000119886 459 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm14465-201ENSMUST00000120603 567 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm10157-201ENSMUST00000139408 343 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm24011-201ENSMUST00000157732 268 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm23007-201ENSMUST00000158951 177 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Mir3078-201ENSMUST00000175231 87 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm21181-201ENSMUST00000186249 330 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm20223-201ENSMUST00000199932 805 ntBASIC6.86□□□□□ -1.31
Trim3Q9R1R2 Gm43558-201ENSMUST00000200155 210 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms