Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Smc1aQ9CU62 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm11865-201ENSMUST00000118093 859 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm12331-201ENSMUST00000119927 622 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm13438-201ENSMUST00000120100 573 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Rsf1os1-201ENSMUST00000126902 324 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm24442-201ENSMUST00000157238 327 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm24369-201ENSMUST00000175387 96 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm6931-201ENSMUST00000183103 371 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm43558-201ENSMUST00000200155 210 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm43928-201ENSMUST00000203737 409 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Gm42595-201ENSMUST00000196771 1607 ntBASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Smc1aQ9CU62 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm23701-201ENSMUST00000103893 110 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm13768-201ENSMUST00000116469 929 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm5759-201ENSMUST00000119203 811 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm11945-201ENSMUST00000120551 476 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm27001-201ENSMUST00000182252 936 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm43243-201ENSMUST00000199964 278 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm44722-201ENSMUST00000206473 436 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm2767-201ENSMUST00000209582 473 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm18972-201ENSMUST00000218873 630 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm10601-201ENSMUST00000120436 1422 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm37283-201ENSMUST00000193111 1571 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm20768-201ENSMUST00000199527 2338 ntBASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Smc1aQ9CU62 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.16□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms