Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Duxbl1-203ENSMUST00000172667 2209 ntTSL 5 BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Gm7328-201ENSMUST00000211123 2225 ntBASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Fbxl2-201ENSMUST00000035090 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Gm42759-201ENSMUST00000195915 2439 ntBASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Dennd2d-204ENSMUST00000183271 2050 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Pcdhb7Q8CDY9 Clca2-201ENSMUST00000040465 3986 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Zfp750-201ENSMUST00000092298 3232 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC166574.1-201ENSMUST00000226916 1309 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm22268-201ENSMUST00000104009 131 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm12643-201ENSMUST00000116078 374 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm5388-201ENSMUST00000120059 1117 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm8682-201ENSMUST00000121310 498 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm6285-201ENSMUST00000122012 498 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm25981-201ENSMUST00000157921 295 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm8224-201ENSMUST00000166178 497 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Mir5625-201ENSMUST00000176598 80 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm27403-201ENSMUST00000184662 214 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm37288-201ENSMUST00000193963 334 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm18864-201ENSMUST00000194518 1051 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm43797-201ENSMUST00000198221 532 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm7769-201ENSMUST00000212900 933 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC120386.1-201ENSMUST00000213434 736 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC132384.8-201ENSMUST00000218152 1204 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Olfr790-204ENSMUST00000218901 1070 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC167202.2-201ENSMUST00000220155 296 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm9305-201ENSMUST00000220962 599 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC165157.2-201ENSMUST00000222265 367 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm46342-201ENSMUST00000223411 602 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC129537.1-201ENSMUST00000226596 1228 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm23104-201ENSMUST00000083722 104 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 AC101875.1-201ENSMUST00000222666 2223 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Pkd2l2-201ENSMUST00000014647 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Gm20501-202ENSMUST00000211303 2194 ntBASIC8.37□□□□□ -1.07
Pcdhb7Q8CDY9 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Elp3-201ENSMUST00000022609 2851 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Gm17473-202ENSMUST00000228544 2071 ntBASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Hcar1-201ENSMUST00000164267 3285 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb7Q8CDY9 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms