Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 BC002163-201ENSMUST00000121906 319 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm29008-201ENSMUST00000189387 298 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm18060-201ENSMUST00000207407 564 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 AC163041.1-201ENSMUST00000221984 133 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Ermard-209ENSMUST00000226561 1019 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.14□□□□□ -1.11
Ccdc38Q8CDN8 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm12710-201ENSMUST00000119011 216 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm12642-201ENSMUST00000121098 876 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm27218-201ENSMUST00000183745 392 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm43212-201ENSMUST00000198208 394 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm18131-201ENSMUST00000199241 449 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm19116-201ENSMUST00000218592 642 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 AC102689.1-201ENSMUST00000220511 1090 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm5316-201ENSMUST00000050391 270 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm9801-201ENSMUST00000054860 408 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.13□□□□□ -1.11
Ccdc38Q8CDN8 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm37914-201ENSMUST00000195317 2679 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Mir763-201ENSMUST00000103249 120 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc38Q8CDN8 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms