Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm13521-201ENSMUST00000118922 866 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Mir1983-201ENSMUST00000157523 132 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm19035-202ENSMUST00000194575 959 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm9110-201ENSMUST00000219035 617 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 CT030705.2-201ENSMUST00000225301 556 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm6887-201ENSMUST00000080945 482 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm24613-201ENSMUST00000083266 130 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 BC085271-201ENSMUST00000191852 1487 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm24869-201ENSMUST00000104072 128 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm14509-201ENSMUST00000117312 1286 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm14126-201ENSMUST00000122345 395 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm18848-201ENSMUST00000182069 792 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm43542-201ENSMUST00000199505 379 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC154785.1-201ENSMUST00000223280 572 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC154640.3-201ENSMUST00000227492 846 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 AC102676.1-201ENSMUST00000228131 719 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC8.54□□□□□ -1.04
Vps53Q8CCB4 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm25757-201ENSMUST00000103986 123 ntBASIC8.53□□□□□ -1.04
Vps53Q8CCB4 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC8.53□□□□□ -1.04
Vps53Q8CCB4 Gm14248-201ENSMUST00000117790 544 ntBASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms