Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Alx1Q8C8B0 Gm9231-201ENSMUST00000220817 1009 ntBASIC8.4□□□□□ -1.06
Alx1Q8C8B0 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Alx1Q8C8B0 AC133598.4-201ENSMUST00000224577 454 ntBASIC8.4□□□□□ -1.06
Alx1Q8C8B0 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.4□□□□□ -1.06
Alx1Q8C8B0 AC158954.1-201ENSMUST00000228272 1006 ntBASIC8.4□□□□□ -1.06
Alx1Q8C8B0 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Alx1Q8C8B0 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Alx1Q8C8B0 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC8.4□□□□□ -1.06
Alx1Q8C8B0 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Alx1Q8C8B0 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Alx1Q8C8B0 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Alx1Q8C8B0 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Alx1Q8C8B0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Alx1Q8C8B0 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Alx1Q8C8B0 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm13423-201ENSMUST00000117205 888 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm16044-201ENSMUST00000118475 450 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm11726-201ENSMUST00000121028 424 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm6489-201ENSMUST00000178167 696 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Mir6241-201ENSMUST00000184225 103 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm29496-201ENSMUST00000189854 693 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm37349-201ENSMUST00000194205 624 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm23734-201ENSMUST00000083753 109 ntBASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Alx1Q8C8B0 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Mir697-201ENSMUST00000102316 109 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm26416-201ENSMUST00000104280 134 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm14869-201ENSMUST00000119007 884 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm9439-201ENSMUST00000119554 973 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm12104-201ENSMUST00000120359 979 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm16357-201ENSMUST00000144091 474 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 CT009711.2-202ENSMUST00000224538 973 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 AC154361.1-201ENSMUST00000225694 745 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Med12-204ENSMUST00000117706 6940 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.38□□□□□ -1.07
Alx1Q8C8B0 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Alx1Q8C8B0 AC122769.1-201ENSMUST00000226930 1714 ntBASIC8.37□□□□□ -1.07
Alx1Q8C8B0 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms