Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ClpbQ60649 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.04□□□□□ -1.28
ClpbQ60649 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ClpbQ60649 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ClpbQ60649 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ClpbQ60649 Atp8b5-204ENSMUST00000107942 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ClpbQ60649 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC7.04□□□□□ -1.28
ClpbQ60649 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.04□□□□□ -1.28
ClpbQ60649 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.04□□□□□ -1.28
ClpbQ60649 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ClpbQ60649 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
ClpbQ60649 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ClpbQ60649 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC7.03□□□□□ -1.28
ClpbQ60649 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 AC124421.1-201ENSMUST00000219114 4154 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm14380-201ENSMUST00000122298 431 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm22915-201ENSMUST00000157615 136 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm24011-201ENSMUST00000157732 268 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm21430-201ENSMUST00000182998 998 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm18428-201ENSMUST00000194986 791 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm44356-201ENSMUST00000196731 111 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.03□□□□□ -1.28
ClpbQ60649 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm45319-201ENSMUST00000210220 318 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm45432-201ENSMUST00000210391 416 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm46379-201ENSMUST00000222551 265 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 AC114573.1-201ENSMUST00000224120 1210 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ClpbQ60649 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Snhg17-209ENSMUST00000186993 3144 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.03□□□□□ -1.28
ClpbQ60649 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ClpbQ60649 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
ClpbQ60649 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
ClpbQ60649 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.28
ClpbQ60649 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
ClpbQ60649 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ClpbQ60649 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ClpbQ60649 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC7.02□□□□□ -1.29
ClpbQ60649 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC7.02□□□□□ -1.29
ClpbQ60649 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
ClpbQ60649 Gm11810-201ENSMUST00000118311 333 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm6877-201ENSMUST00000119347 1101 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm11188-201ENSMUST00000122382 388 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.02□□□□□ -1.29
ClpbQ60649 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC7.02□□□□□ -1.29
ClpbQ60649 Gm9697-201ENSMUST00000147052 997 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Gm26357-201ENSMUST00000158218 115 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ClpbQ60649 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm7991-201ENSMUST00000168668 591 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm6536-201ENSMUST00000171180 615 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ClpbQ60649 Gm8919-201ENSMUST00000182028 1014 ntBASIC7.02□□□□□ -1.29
ClpbQ60649 Gm26959-201ENSMUST00000182376 978 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms