Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm14445-201ENSMUST00000117051 1484 ntBASIC7.36□□□□□ -1.23
Nup43P59235 BC085271-201ENSMUST00000191852 1487 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup43P59235 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup43P59235 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm11443-201ENSMUST00000118790 479 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm13680-201ENSMUST00000119790 793 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm9378-201ENSMUST00000120315 471 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm14848-201ENSMUST00000121850 467 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC7.36□□□□□ -1.23
Nup43P59235 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.36□□□□□ -1.23
Nup43P59235 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm22847-201ENSMUST00000157707 105 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm16300-201ENSMUST00000160031 1279 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC7.36□□□□□ -1.23
Nup43P59235 Gm9890-201ENSMUST00000171867 537 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm26505-201ENSMUST00000176208 166 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Rps19-ps6-201ENSMUST00000181233 438 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup43P59235 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm36961-201ENSMUST00000191980 132 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm37339-201ENSMUST00000194142 392 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm18747-201ENSMUST00000198129 648 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Mrps33-204ENSMUST00000201461 717 ntTSL 2 BASIC7.36□□□□□ -1.23
Nup43P59235 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm44212-201ENSMUST00000205016 897 ntBASIC7.36□□□□□ -1.23
Nup43P59235 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm45693-201ENSMUST00000211391 1157 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm18160-201ENSMUST00000214279 827 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Gm18378-201ENSMUST00000216245 628 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm18039-201ENSMUST00000217816 728 ntBASIC7.36□□□□□ -1.23
Nup43P59235 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Gm4898-201ENSMUST00000218519 832 ntBASIC7.36□□□□□ -1.23
Nup43P59235 AC165349.2-201ENSMUST00000219097 426 ntBASIC7.36□□□□□ -1.23
Nup43P59235 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC7.36□□□□□ -1.23
Nup43P59235 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 AC118249.1-201ENSMUST00000224822 608 ntBASIC7.36□□□□□ -1.23
Nup43P59235 AC154184.2-201ENSMUST00000225335 349 ntBASIC7.36□□□□□ -1.23
Nup43P59235 AC164116.2-201ENSMUST00000225398 1038 ntBASIC7.36□□□□□ -1.23
Nup43P59235 AC154760.1-201ENSMUST00000227218 673 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
Nup43P59235 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Gm43623-201ENSMUST00000199289 2663 ntBASIC7.36□□□□□ -1.23
Nup43P59235 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
Nup43P59235 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Nup43P59235 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Nup43P59235 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Nup43P59235 Gm45360-201ENSMUST00000210698 1405 ntBASIC7.35□□□□□ -1.23
Nup43P59235 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup43P59235 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup43P59235 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup43P59235 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup43P59235 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Nup43P59235 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup43P59235 Rnase6-202ENSMUST00000226194 2452 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Nup43P59235 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Nup43P59235 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Nup43P59235 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.35□□□□□ -1.23
Nup43P59235 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms