Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NcanP55066 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.8□□□□□ -1.16
NcanP55066 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC7.8□□□□□ -1.16
NcanP55066 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.8□□□□□ -1.16
NcanP55066 Rpgr-203ENSMUST00000073392 2926 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Mlip-210ENSMUST00000184322 2668 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 AC153955.4-201ENSMUST00000217069 2752 ntBASIC7.8□□□□□ -1.16
NcanP55066 Gm20731-201ENSMUST00000193462 2288 ntBASIC7.8□□□□□ -1.16
NcanP55066 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
NcanP55066 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Gm11271-201ENSMUST00000116054 440 ntBASIC7.8□□□□□ -1.16
NcanP55066 Gm13282-201ENSMUST00000121577 545 ntBASIC7.8□□□□□ -1.16
NcanP55066 Mir1929-201ENSMUST00000158635 93 ntBASIC7.8□□□□□ -1.16
NcanP55066 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.8□□□□□ -1.16
NcanP55066 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC7.8□□□□□ -1.16
NcanP55066 Igkv3-8-201ENSMUST00000197635 339 ntBASIC7.8□□□□□ -1.16
NcanP55066 Gm18980-201ENSMUST00000199098 1079 ntBASIC7.8□□□□□ -1.16
NcanP55066 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Gm18562-201ENSMUST00000209949 915 ntBASIC7.8□□□□□ -1.16
NcanP55066 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.8□□□□□ -1.16
NcanP55066 CT009713.1-201ENSMUST00000224828 853 ntBASIC7.8□□□□□ -1.16
NcanP55066 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.8□□□□□ -1.16
NcanP55066 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Vmn1r64-201ENSMUST00000078475 1011 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NcanP55066 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Gm5386-201ENSMUST00000121749 2450 ntBASIC7.8□□□□□ -1.16
NcanP55066 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NcanP55066 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
NcanP55066 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.8□□□□□ -1.16
NcanP55066 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Olfr157-201ENSMUST00000214281 6617 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.79□□□□□ -1.16
NcanP55066 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
NcanP55066 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 Gm16221-201ENSMUST00000117331 393 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gm14712-201ENSMUST00000120195 772 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gm12540-201ENSMUST00000121938 319 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Gm9672-201ENSMUST00000166437 425 ntBASIC7.79□□□□□ -1.16
NcanP55066 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
NcanP55066 Gm20397-201ENSMUST00000174520 362 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gm5260-201ENSMUST00000186157 949 ntBASIC7.79□□□□□ -1.16
NcanP55066 Gm30517-201ENSMUST00000197350 772 ntBASIC7.79□□□□□ -1.16
NcanP55066 Igkv12-67-201ENSMUST00000197806 354 ntBASIC7.79□□□□□ -1.16
NcanP55066 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Gm9269-201ENSMUST00000221661 578 ntBASIC7.79□□□□□ -1.16
NcanP55066 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
NcanP55066 Mir138-1-201ENSMUST00000083480 99 ntBASIC7.79□□□□□ -1.16
NcanP55066 Mir106b-201ENSMUST00000083580 82 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms