Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm20128-201ENSMUST00000196189 417 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm19596-201ENSMUST00000203685 739 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm18840-201ENSMUST00000204553 506 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Sox1P53783 Gm45626-201ENSMUST00000210093 361 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.06□□□□□ -1.12
Sox1P53783 AC122901.2-201ENSMUST00000216926 285 ntBASIC8.06□□□□□ -1.12
Sox1P53783 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC8.06□□□□□ -1.12
Sox1P53783 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Sox1P53783 Gm25926-201ENSMUST00000082899 160 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm37962-201ENSMUST00000195535 2034 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Atp2c1-212ENSMUST00000176770 2781 ntTSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Adcy4-202ENSMUST00000170223 3501 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Gm15066-201ENSMUST00000120163 2608 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Def8-205ENSMUST00000108832 3242 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 Def8-201ENSMUST00000001522 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Sox1P53783 BC085271-201ENSMUST00000191852 1487 ntBASIC8.06□□□□□ -1.12
Sox1P53783 Dync1i2-207ENSMUST00000112142 2585 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 Zfp93-202ENSMUST00000108438 3508 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Sox1P53783 AC114002.1-201ENSMUST00000218097 2409 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Gm37842-201ENSMUST00000192330 1569 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 Arhgef9-205ENSMUST00000113883 5399 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sox1P53783 Gli3-201ENSMUST00000110510 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sox1P53783 Rnf6-208ENSMUST00000169407 3276 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Sox1P53783 Fam168a-205ENSMUST00000207875 4077 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Zc3h3-201ENSMUST00000100538 3360 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Sox1P53783 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Gm11880-201ENSMUST00000117612 399 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm14648-201ENSMUST00000119328 483 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm11991-201ENSMUST00000119652 1074 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm15081-201ENSMUST00000119794 844 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm13532-201ENSMUST00000120373 240 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm13726-201ENSMUST00000121278 794 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Olfr397-201ENSMUST00000121280 1091 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm12369-201ENSMUST00000121343 942 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Rpl21-ps15-201ENSMUST00000121545 483 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm15878-201ENSMUST00000127561 306 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm6100-201ENSMUST00000180253 403 ntBASIC8.05□□□□□ -1.12
Sox1P53783 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC8.05□□□□□ -1.12
Sox1P53783 Mir7653-201ENSMUST00000184358 61 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm28847-201ENSMUST00000186778 700 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm42720-201ENSMUST00000196813 300 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm44282-201ENSMUST00000203199 190 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm44233-201ENSMUST00000203616 226 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm6064-201ENSMUST00000203999 454 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm44243-201ENSMUST00000204323 692 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Gm44809-201ENSMUST00000208305 993 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm19137-201ENSMUST00000213790 1164 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm19161-201ENSMUST00000217958 737 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC8.05□□□□□ -1.12
Sox1P53783 AC151982.1-201ENSMUST00000223546 464 ntBASIC8.05□□□□□ -1.12
Sox1P53783 AC241621.1-201ENSMUST00000224499 430 ntBASIC8.05□□□□□ -1.12
Sox1P53783 AC126805.1-201ENSMUST00000225142 262 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC8.05□□□□□ -1.12
Sox1P53783 Olfr1444-201ENSMUST00000059675 1129 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sox1P53783 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Mir3068-201ENSMUST00000083004 136 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Sox1P53783 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Sox1P53783 AC139754.2-201ENSMUST00000218037 1455 ntBASIC8.05□□□□□ -1.12
Sox1P53783 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Ces3a-202ENSMUST00000093223 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Sox1P53783 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms