Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm19007-201ENSMUST00000217746 874 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 AC117949.1-201ENSMUST00000225547 419 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shmt1P50431 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shmt1P50431 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm22504-201ENSMUST00000082963 139 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.78□□□□□ -1.16
Shmt1P50431 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Shmt1P50431 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.78□□□□□ -1.16
Shmt1P50431 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm37043-201ENSMUST00000194609 3105 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm26967-201ENSMUST00000182878 2303 ntBASIC7.78□□□□□ -1.16
Shmt1P50431 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Shmt1P50431 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Shmt1P50431 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.77□□□□□ -1.16
Shmt1P50431 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.77□□□□□ -1.16
Shmt1P50431 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
Shmt1P50431 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm22438-201ENSMUST00000104049 132 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm11726-201ENSMUST00000121028 424 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm24239-201ENSMUST00000157791 255 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC7.77□□□□□ -1.17
Shmt1P50431 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm27001-201ENSMUST00000182252 936 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm37005-201ENSMUST00000193281 1164 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gm37260-201ENSMUST00000193748 1251 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gm42782-201ENSMUST00000197286 522 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm43894-201ENSMUST00000203274 688 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gm44590-201ENSMUST00000206161 391 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Shmt1P50431 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.77□□□□□ -1.17
Shmt1P50431 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 AC159205.2-201ENSMUST00000223759 816 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Mir455-201ENSMUST00000093594 82 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm37022-201ENSMUST00000192517 2254 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Shmt1P50431 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Shmt1P50431 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Shmt1P50431 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Shmt1P50431 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.77□□□□□ -1.17
Shmt1P50431 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Shmt1P50431 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC7.76□□□□□ -1.17
Shmt1P50431 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm26474-201ENSMUST00000116762 122 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm5752-201ENSMUST00000117771 594 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Shmt1P50431 Gm13545-201ENSMUST00000119044 482 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm14631-201ENSMUST00000119067 594 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm13877-201ENSMUST00000120614 417 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm25180-201ENSMUST00000157746 115 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm22882-201ENSMUST00000157749 124 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Gm8715-201ENSMUST00000162728 531 ntBASIC7.76□□□□□ -1.17
Shmt1P50431 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms