Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Rfx3P48381 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Rfx3P48381 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm15049-201ENSMUST00000120474 463 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm11343-201ENSMUST00000120579 599 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC6.54□□□□□ -1.36
Rfx3P48381 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm4835-201ENSMUST00000155839 972 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm23079-201ENSMUST00000157847 117 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm27617-201ENSMUST00000184321 168 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Mir7029-201ENSMUST00000184777 61 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Mir6403-201ENSMUST00000185007 129 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm43212-201ENSMUST00000198208 394 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm18131-201ENSMUST00000199241 449 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm18765-201ENSMUST00000203166 660 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Rfx3P48381 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Mir24-2-201ENSMUST00000083607 107 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
Rfx3P48381 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.54□□□□□ -1.36
Rfx3P48381 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC6.54□□□□□ -1.36
Rfx3P48381 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Rfx3P48381 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Rfx3P48381 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Gm43747-201ENSMUST00000201412 1330 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx3P48381 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Rfx3P48381 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
Rfx3P48381 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx3P48381 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Rfx3P48381 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Rfx3P48381 Gm15096-201ENSMUST00000121918 878 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.53□□□□□ -1.36
Rfx3P48381 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC6.53□□□□□ -1.36
Rfx3P48381 Gm24011-201ENSMUST00000157732 268 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Rfx3P48381 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Rfx3P48381 Gm28728-201ENSMUST00000189087 405 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Trbv9-201ENSMUST00000194494 290 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.53□□□□□ -1.36
Rfx3P48381 Gm18690-201ENSMUST00000204488 985 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 Gm9240-201ENSMUST00000206527 742 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.53□□□□□ -1.36
Rfx3P48381 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.53□□□□□ -1.36
Rfx3P48381 Gm19011-201ENSMUST00000221777 808 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 AC154747.4-202ENSMUST00000223826 852 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 CT009728.1-201ENSMUST00000225228 1050 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 AC126939.4-201ENSMUST00000225360 743 ntBASIC6.53□□□□□ -1.36
Rfx3P48381 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms