Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm37904-201ENSMUST00000195591 312 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Ighv8-16-201ENSMUST00000199258 294 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Zc2hc1b-201ENSMUST00000019954 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm43690-201ENSMUST00000201213 266 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm45889-201ENSMUST00000209535 1057 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm8268-201ENSMUST00000209683 458 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 AC163660.1-201ENSMUST00000223696 818 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 AC167013.6-201ENSMUST00000226587 1067 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Sdc1P18828 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
Sdc1P18828 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm43168-201ENSMUST00000201039 1612 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Mbnl2-203ENSMUST00000226800 3328 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.78□□□□□ -1.48
Sdc1P18828 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm24195-201ENSMUST00000116804 137 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm15913-201ENSMUST00000118492 331 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC5.78□□□□□ -1.48
Sdc1P18828 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm25372-201ENSMUST00000158161 255 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 n-R5s115-201ENSMUST00000179019 119 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm7481-201ENSMUST00000182020 995 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Kif4-ps-202ENSMUST00000185083 652 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm5244-202ENSMUST00000189517 743 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm43436-201ENSMUST00000199308 147 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 AC155941.3-201ENSMUST00000218476 308 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Tcstv3-202ENSMUST00000223967 779 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sdc1P18828 AC126939.2-201ENSMUST00000225989 307 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Cthrc1-204ENSMUST00000226433 596 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Sdc1P18828 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm5436-201ENSMUST00000058103 643 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 n-R5s193-201ENSMUST00000082864 109 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm24405-201ENSMUST00000083033 167 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm6378-201ENSMUST00000084199 444 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC5.78□□□□□ -1.48
Sdc1P18828 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Sdc1P18828 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Sdc1P18828 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC5.78□□□□□ -1.48
Sdc1P18828 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Sdc1P18828 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms