Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.49□□□□□ -1.05
Col1a1P11087 CT009495.1-201ENSMUST00000224221 862 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm19210-201ENSMUST00000199562 1350 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.49□□□□□ -1.05
Col1a1P11087 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Col1a1P11087 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Etl4-205ENSMUST00000114607 3055 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Col1a1P11087 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Snord88a-201ENSMUST00000116723 90 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Gm15763-201ENSMUST00000120136 403 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Gm23903-201ENSMUST00000157566 131 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Gm23756-201ENSMUST00000157582 114 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC8.48□□□□□ -1.05
Col1a1P11087 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Col1a1P11087 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC8.48□□□□□ -1.05
Col1a1P11087 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC8.48□□□□□ -1.05
Col1a1P11087 Gm18012-201ENSMUST00000204558 773 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Gm44571-201ENSMUST00000208092 533 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Gm5928-201ENSMUST00000221839 466 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 AC105324.1-201ENSMUST00000227844 386 ntBASIC8.48□□□□□ -1.05
Col1a1P11087 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Col1a1P11087 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC8.48□□□□□ -1.05
Col1a1P11087 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Col1a1P11087 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Col1a1P11087 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Col1a1P11087 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm24709-201ENSMUST00000104123 132 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm25724-201ENSMUST00000104531 117 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm13878-201ENSMUST00000117986 577 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm11343-201ENSMUST00000120579 599 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm11553-201ENSMUST00000120682 240 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm15349-201ENSMUST00000121154 204 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Col1a1P11087 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm27804-201ENSMUST00000185135 119 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC8.47□□□□□ -1.05
Col1a1P11087 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.47□□□□□ -1.05
Col1a1P11087 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 AC156559.2-201ENSMUST00000224403 384 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.47□□□□□ -1.05
Col1a1P11087 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Col1a1P11087 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Col1a1P11087 Gm15229-201ENSMUST00000146636 1398 ntBASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms