Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Chmp4bQ9D8B3 Gm6011-201ENSMUST00000211736 1796 ntBASIC9.19□□□□□ -0.94
Chmp4bQ9D8B3 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Chmp4bQ9D8B3 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm24139-201ENSMUST00000122780 288 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Mir3072-201ENSMUST00000175610 83 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm25947-201ENSMUST00000180343 110 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Mir6409-201ENSMUST00000184957 92 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm38305-201ENSMUST00000194825 223 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm37724-201ENSMUST00000195240 1221 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm43395-201ENSMUST00000198717 2240 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 AC123705.1-201ENSMUST00000222512 2058 ntBASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Chmp4bQ9D8B3 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm43953-201ENSMUST00000203709 2867 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm43728-201ENSMUST00000198817 2622 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm6490-201ENSMUST00000111862 461 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm11320-201ENSMUST00000119434 463 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm13163-201ENSMUST00000119875 336 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm13038-201ENSMUST00000119886 459 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm14787-201ENSMUST00000121236 388 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm12920-201ENSMUST00000121818 1186 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm28416-201ENSMUST00000188334 292 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm29435-201ENSMUST00000191310 689 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm38337-201ENSMUST00000193986 599 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm42965-201ENSMUST00000201254 250 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm31579-201ENSMUST00000203306 966 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 CT009738.1-201ENSMUST00000219031 809 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm6807-201ENSMUST00000077435 888 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm8844-201ENSMUST00000119460 2614 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm34294-201ENSMUST00000191912 4263 ntBASIC9.17□□□□□ -0.94
Chmp4bQ9D8B3 Gm42994-201ENSMUST00000195964 2549 ntBASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Chmp4bQ9D8B3 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms