Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm23701-201ENSMUST00000103893 110 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm25631-201ENSMUST00000104390 130 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm11416-201ENSMUST00000119111 863 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm15129-201ENSMUST00000119673 279 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm13724-201ENSMUST00000122395 1155 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm16297-201ENSMUST00000161466 459 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm3611-201ENSMUST00000173687 877 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm26784-201ENSMUST00000181666 410 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm34144-201ENSMUST00000197039 259 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm6681-201ENSMUST00000205215 607 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm40853-201ENSMUST00000221342 582 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm9255-201ENSMUST00000223225 581 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm10108-201ENSMUST00000078246 319 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Vps53Q8CCB4 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm44228-201ENSMUST00000204888 2026 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm24893-201ENSMUST00000122745 369 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm7651-201ENSMUST00000173398 901 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Mir8097-201ENSMUST00000185150 119 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm44931-201ENSMUST00000206056 545 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 AC140451.1-201ENSMUST00000227984 737 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Vps53Q8CCB4 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Vps53Q8CCB4 Gm25614-201ENSMUST00000104013 133 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms