Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 CT009738.1-201ENSMUST00000219031 809 ntBASIC10.18□□□□□ -0.78
Usp47Q8BY87 AC127242.3-201ENSMUST00000222009 580 ntBASIC10.18□□□□□ -0.78
Usp47Q8BY87 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 AC165157.1-201ENSMUST00000222981 580 ntBASIC10.18□□□□□ -0.78
Usp47Q8BY87 AC133598.3-204ENSMUST00000224260 767 ntBASIC10.18□□□□□ -0.78
Usp47Q8BY87 AC101205.1-201ENSMUST00000227916 907 ntBASIC10.18□□□□□ -0.78
Usp47Q8BY87 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Usp47Q8BY87 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 CT025642.2-201ENSMUST00000225009 1649 ntBASIC10.18□□□□□ -0.78
Usp47Q8BY87 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Usp47Q8BY87 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm22774-201ENSMUST00000102084 109 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm25498-201ENSMUST00000104424 129 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm13196-201ENSMUST00000118297 379 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm24157-201ENSMUST00000175265 111 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm28801-201ENSMUST00000188761 449 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm43212-201ENSMUST00000198208 394 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 AC133958.1-201ENSMUST00000227085 961 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm5446-201ENSMUST00000091762 784 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Olfr1352-201ENSMUST00000058991 4356 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm44895-201ENSMUST00000206670 1538 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Snhg17-209ENSMUST00000186993 3144 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm13821-201ENSMUST00000202029 3201 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Usp47Q8BY87 Gm42866-201ENSMUST00000195919 3304 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Usp47Q8BY87 AC129308.1-201ENSMUST00000223800 2309 ntBASIC10.17□□□□□ -0.78
Usp47Q8BY87 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm26025-201ENSMUST00000158655 271 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm24680-201ENSMUST00000158759 126 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm27178-201ENSMUST00000184962 340 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ighv1-29-201ENSMUST00000194116 342 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm30517-201ENSMUST00000197350 772 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Igkv4-77-201ENSMUST00000199410 352 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 AC151904.5-201ENSMUST00000218975 549 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm9110-201ENSMUST00000219035 617 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 AC154380.1-201ENSMUST00000226804 720 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 n-R5s169-201ENSMUST00000083110 120 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 AC107763.1-202ENSMUST00000225021 2663 ntBASIC10.16□□□□□ -0.78
Usp47Q8BY87 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Usp47Q8BY87 Gm15229-201ENSMUST00000146636 1398 ntBASIC10.15□□□□□ -0.78
Usp47Q8BY87 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Usp47Q8BY87 Gm11889-201ENSMUST00000118402 1079 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms