Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm25167-201ENSMUST00000104188 120 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm16056-201ENSMUST00000119293 135 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 n-R5s47-201ENSMUST00000122516 119 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm5445-201ENSMUST00000180224 480 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm37152-201ENSMUST00000193369 1175 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm38070-201ENSMUST00000191850 6480 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm26831-201ENSMUST00000181458 1380 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Gm5087-201ENSMUST00000060526 1921 ntTSL 2 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Ccdc40Q8BI79 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Zfp113-202ENSMUST00000132318 488 ntTSL 3 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm22670-201ENSMUST00000158724 143 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm6931-201ENSMUST00000183103 371 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Mir8095-201ENSMUST00000185103 129 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm9451-201ENSMUST00000188491 604 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm43526-201ENSMUST00000196666 1565 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Gm9801-201ENSMUST00000054860 408 ntBASIC7.65□□□□□ -1.18
Ccdc40Q8BI79 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms