Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm18960-201ENSMUST00000222962 713 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 AV026068-219ENSMUST00000224148 933 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 AC159205.1-201ENSMUST00000225513 1099 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 AC154324.1-201ENSMUST00000226711 814 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 CT573019.1-201ENSMUST00000227762 1689 ntBASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Usp49Q6P9L4 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm25916-201ENSMUST00000104263 131 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm24986-201ENSMUST00000104452 132 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm7129-201ENSMUST00000117402 997 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm8812-201ENSMUST00000118496 412 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Mir1981-201ENSMUST00000157934 82 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm17047-201ENSMUST00000167709 430 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm4308-201ENSMUST00000179735 914 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm8357-201ENSMUST00000181115 1011 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm28142-201ENSMUST00000186899 698 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm28952-201ENSMUST00000189285 681 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm45198-201ENSMUST00000206796 591 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 CT030166.4-201ENSMUST00000220640 404 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm36758-201ENSMUST00000222594 310 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm44185-201ENSMUST00000204539 3307 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm44769-201ENSMUST00000206120 2809 ntBASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.1□□□□□ -1.11
Usp49Q6P9L4 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm25725-201ENSMUST00000104528 130 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm13414-201ENSMUST00000117516 727 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm15203-201ENSMUST00000117668 455 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm7571-201ENSMUST00000120252 927 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm25178-201ENSMUST00000122633 325 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm22024-201ENSMUST00000122733 287 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm24422-201ENSMUST00000157800 119 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm37436-201ENSMUST00000193842 1085 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm8921-201ENSMUST00000204306 649 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm18559-201ENSMUST00000208249 604 ntBASIC8.09□□□□□ -1.11
Usp49Q6P9L4 Gm5791-201ENSMUST00000220840 489 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms