Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm42968-201ENSMUST00000198578 1372 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm12586-201ENSMUST00000117328 1316 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 n-R5s1-201ENSMUST00000101925 119 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm24462-201ENSMUST00000102430 106 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm24373-201ENSMUST00000104393 132 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm12851-201ENSMUST00000117920 421 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm11585-201ENSMUST00000120901 569 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm22224-201ENSMUST00000157357 93 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm24883-201ENSMUST00000158391 281 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm2951-201ENSMUST00000169447 490 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm43108-201ENSMUST00000200525 293 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm44380-201ENSMUST00000203125 293 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm44837-201ENSMUST00000206863 717 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm38430-201ENSMUST00000209888 1240 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm18996-201ENSMUST00000214851 755 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm4898-201ENSMUST00000218519 832 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 AC162934.3-201ENSMUST00000223015 841 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 AC157650.2-201ENSMUST00000224666 328 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 AC124196.1-201ENSMUST00000225970 1032 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Olfr120-201ENSMUST00000077498 993 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm44752-201ENSMUST00000207140 3305 ntBASIC5.86□□□□□ -1.47
Cdx4Q07424 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
Cdx4Q07424 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.85□□□□□ -1.47
Cdx4Q07424 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 AC151984.1-201ENSMUST00000218261 2976 ntBASIC5.85□□□□□ -1.47
Cdx4Q07424 AC154141.1-201ENSMUST00000208403 4136 ntBASIC5.85□□□□□ -1.47
Cdx4Q07424 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Cdx4Q07424 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Cdx4Q07424 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC5.85□□□□□ -1.47
Cdx4Q07424 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.85□□□□□ -1.47
Cdx4Q07424 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.85□□□□□ -1.47
Cdx4Q07424 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC5.85□□□□□ -1.47
Cdx4Q07424 Gm43571-201ENSMUST00000200067 3098 ntBASIC5.85□□□□□ -1.47
Cdx4Q07424 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms