Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nphp4P59240 AC124184.1-201ENSMUST00000218167 283 ntBASIC9.79□□□□□ -0.84
Nphp4P59240 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Nphp4P59240 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Nphp4P59240 Snora21-201ENSMUST00000082967 137 ntBASIC9.79□□□□□ -0.84
Nphp4P59240 Gm24451-201ENSMUST00000083353 133 ntBASIC9.79□□□□□ -0.84
Nphp4P59240 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC9.79□□□□□ -0.84
Nphp4P59240 Pcdh15-216ENSMUST00000131724 6322 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Nphp4P59240 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Nphp4P59240 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm6679-201ENSMUST00000191467 1869 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Gm2762-207ENSMUST00000202739 2665 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm13732-201ENSMUST00000117753 535 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Gm15310-201ENSMUST00000117891 372 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Gm14466-201ENSMUST00000119028 451 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Gm6987-201ENSMUST00000119319 428 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.78□□□□□ -0.84
Nphp4P59240 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.78□□□□□ -0.84
Nphp4P59240 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm29141-201ENSMUST00000190357 882 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm17834-201ENSMUST00000204322 891 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm43339-201ENSMUST00000200032 1606 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Nphp4P59240 Gm37403-201ENSMUST00000193775 3521 ntBASIC9.78□□□□□ -0.84
Nphp4P59240 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Nphp4P59240 Pcm1-201ENSMUST00000045218 6624 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Nphp4P59240 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nphp4P59240 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Nphp4P59240 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nphp4P59240 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC9.77□□□□□ -0.84
Nphp4P59240 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Nphp4P59240 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nphp4P59240 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nphp4P59240 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nphp4P59240 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Nphp4P59240 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nphp4P59240 Mir674-201ENSMUST00000102421 100 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Mir760-201ENSMUST00000103257 119 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm25093-201ENSMUST00000103993 132 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm14612-201ENSMUST00000121522 881 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm12778-201ENSMUST00000122341 333 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm22642-201ENSMUST00000175352 252 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm42580-201ENSMUST00000197223 753 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm43212-201ENSMUST00000198208 394 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm5154-201ENSMUST00000203971 399 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm4042-201ENSMUST00000216946 637 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC9.77□□□□□ -0.85
Nphp4P59240 AC152394.1-201ENSMUST00000227360 1086 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm37648-201ENSMUST00000192072 2563 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nphp4P59240 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm15109-201ENSMUST00000133085 2026 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.77□□□□□ -0.85
Nphp4P59240 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Nphp4P59240 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Nphp4P59240 Ankrd27-201ENSMUST00000040844 4284 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Nphp4P59240 Gm43335-201ENSMUST00000198299 3276 ntBASIC9.76□□□□□ -0.85
Nphp4P59240 Gm42668-201ENSMUST00000200747 2487 ntBASIC9.76□□□□□ -0.85
Nphp4P59240 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Nphp4P59240 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Nphp4P59240 Gm14863-201ENSMUST00000119648 307 ntBASIC9.76□□□□□ -0.85
Nphp4P59240 Gm13237-201ENSMUST00000122151 635 ntBASIC9.76□□□□□ -0.85
Nphp4P59240 Gm3326-201ENSMUST00000164656 1043 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms