Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm43471-201ENSMUST00000197550 467 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm18765-201ENSMUST00000203166 660 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC7.05□□□□□ -1.28
Sox3P53784 Gm8489-201ENSMUST00000209876 1152 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.05□□□□□ -1.28
Sox3P53784 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Sox3P53784 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 AC154257.1-201ENSMUST00000224811 1525 ntBASIC7.05□□□□□ -1.28
Sox3P53784 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Sox3P53784 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Sox3P53784 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Sox3P53784 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox3P53784 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm23323-201ENSMUST00000104471 133 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm14864-201ENSMUST00000116164 1087 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm14863-201ENSMUST00000119648 307 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC7.04□□□□□ -1.28
Sox3P53784 Gm23533-201ENSMUST00000157540 245 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm22132-201ENSMUST00000175316 100 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm26505-201ENSMUST00000176208 166 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm21181-201ENSMUST00000186249 330 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm28980-201ENSMUST00000187877 219 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm28117-201ENSMUST00000188472 371 ntBASIC7.04□□□□□ -1.28
Sox3P53784 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm42464-201ENSMUST00000196717 417 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm43542-201ENSMUST00000199505 379 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm34701-201ENSMUST00000204213 849 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm17822-201ENSMUST00000204307 351 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox3P53784 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.04□□□□□ -1.28
Sox3P53784 AC123920.1-201ENSMUST00000221449 384 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox3P53784 AC238940.2-201ENSMUST00000224202 330 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Sox3P53784 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
Sox3P53784 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.04□□□□□ -1.28
Sox3P53784 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 AC135669.2-201ENSMUST00000215636 4958 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Sox3P53784 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Sox3P53784 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC7.04□□□□□ -1.28
Sox3P53784 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Sox3P53784 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox3P53784 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Sox3P53784 Gm28497-201ENSMUST00000189646 3029 ntBASIC7.03□□□□□ -1.28
Sox3P53784 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox3P53784 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox3P53784 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Sox3P53784 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC7.03□□□□□ -1.28
Sox3P53784 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.03□□□□□ -1.28
Sox3P53784 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Sox3P53784 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox3P53784 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox3P53784 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox3P53784 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox3P53784 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Sox3P53784 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Sox3P53784 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC7.03□□□□□ -1.28
Sox3P53784 Gm25877-201ENSMUST00000104326 129 ntBASIC7.03□□□□□ -1.28
Sox3P53784 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Sox3P53784 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Sox3P53784 Gm14772-201ENSMUST00000116562 514 ntBASIC7.03□□□□□ -1.28
Sox3P53784 Gm15763-201ENSMUST00000120136 403 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms