Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC158750.1-201ENSMUST00000226163 634 ntBASIC11.07□□□□□ -0.64
Cux1P53564 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cux1P53564 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC11.07□□□□□ -0.64
Cux1P53564 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cux1P53564 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cux1P53564 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cux1P53564 Gm37372-201ENSMUST00000193577 3311 ntBASIC11.07□□□□□ -0.64
Cux1P53564 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.07□□□□□ -0.64
Cux1P53564 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cux1P53564 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cux1P53564 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cux1P53564 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Gm4951-201ENSMUST00000031549 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Gm14772-201ENSMUST00000116562 514 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Snord88a-201ENSMUST00000116723 90 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm14865-201ENSMUST00000117523 494 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm11796-201ENSMUST00000120208 972 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm22428-201ENSMUST00000158554 132 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm7426-201ENSMUST00000179046 404 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Mir7082-201ENSMUST00000183526 92 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm3511-201ENSMUST00000199823 204 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 AC126554.3-201ENSMUST00000223131 493 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm37496-201ENSMUST00000191930 2509 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Gm43533-201ENSMUST00000202933 2936 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Tmem161b-206ENSMUST00000225069 2414 ntBASIC11.06□□□□□ -0.64
Cux1P53564 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Unc13d-203ENSMUST00000106451 3973 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cux1P53564 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cux1P53564 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Gm22284-201ENSMUST00000104132 132 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
Cux1P53564 Gm16057-201ENSMUST00000120811 759 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Gm12140-201ENSMUST00000121214 544 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Gm25178-201ENSMUST00000122633 325 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Gm28958-201ENSMUST00000185864 703 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Gm37189-201ENSMUST00000192131 298 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Gm17895-201ENSMUST00000194028 874 ntBASIC11.05□□□□□ -0.64
Cux1P53564 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Gm44163-201ENSMUST00000205140 475 ntBASIC11.05□□□□□ -0.64
Cux1P53564 AL929555.1-201ENSMUST00000215283 509 ntBASIC11.05□□□□□ -0.64
Cux1P53564 AC165349.1-201ENSMUST00000217896 424 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cux1P53564 Snora21-201ENSMUST00000082967 137 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Mir3068-201ENSMUST00000083004 136 ntBASIC11.05□□□□□ -0.64
Cux1P53564 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC11.05□□□□□ -0.64
Cux1P53564 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Zbtb34-201ENSMUST00000091037 6510 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Tirap-201ENSMUST00000175765 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC11.05□□□□□ -0.64
Cux1P53564 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cux1P53564 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC11.04□□□□□ -0.64
Cux1P53564 Gm13176-201ENSMUST00000117910 477 ntBASIC11.04□□□□□ -0.64
Cux1P53564 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cux1P53564 Gm16027-201ENSMUST00000161618 758 ntBASIC11.04□□□□□ -0.64
Cux1P53564 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cux1P53564 Mir7046-201ENSMUST00000183435 66 ntBASIC11.04□□□□□ -0.64
Cux1P53564 Gm37439-201ENSMUST00000193150 856 ntBASIC11.04□□□□□ -0.64
Cux1P53564 Gm37328-201ENSMUST00000193191 640 ntBASIC11.04□□□□□ -0.64
Cux1P53564 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC11.04□□□□□ -0.64
Cux1P53564 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cux1P53564 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cux1P53564 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms