Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm13282-201ENSMUST00000121577 545 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm12833-201ENSMUST00000136112 477 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm23386-201ENSMUST00000158585 144 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm24824-201ENSMUST00000175097 78 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm29143-201ENSMUST00000189462 201 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm28586-201ENSMUST00000189857 456 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm7369-201ENSMUST00000192738 936 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.57□□□□□ -1.2
Cxcl12P40224 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 AC187103.4-201ENSMUST00000225399 300 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm26896-201ENSMUST00000180482 2526 ntTSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cxcl12P40224 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.57□□□□□ -1.2
Cxcl12P40224 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC7.57□□□□□ -1.2
Cxcl12P40224 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm38236-201ENSMUST00000192661 3229 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm22370-201ENSMUST00000102422 83 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm22267-201ENSMUST00000104008 131 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm10913-201ENSMUST00000133732 463 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm23756-201ENSMUST00000157582 114 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm34768-201ENSMUST00000193884 565 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm37901-201ENSMUST00000195107 514 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm42767-201ENSMUST00000198583 632 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.56□□□□□ -1.2
Cxcl12P40224 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.56□□□□□ -1.2
Cxcl12P40224 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Mir3068-201ENSMUST00000083004 136 ntBASIC7.56□□□□□ -1.2
Cxcl12P40224 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cxcl12P40224 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cxcl12P40224 Gm43189-201ENSMUST00000196040 3069 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 AC122426.2-201ENSMUST00000216522 2947 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Cxcl12P40224 AC166574.5-201ENSMUST00000227438 1432 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Cxcl12P40224 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Runx1t1-203ENSMUST00000098257 2332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm4919-201ENSMUST00000117825 604 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm11257-201ENSMUST00000121313 315 ntBASIC7.55□□□□□ -1.2
Cxcl12P40224 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms