Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm8916-201ENSMUST00000119732 949 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gm15763-201ENSMUST00000120136 403 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gm11945-201ENSMUST00000120551 476 ntBASIC8.53□□□□□ -1.04
Traf1P39428 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Gm22882-201ENSMUST00000157749 124 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gm5611-201ENSMUST00000164523 852 ntBASIC8.53□□□□□ -1.04
Traf1P39428 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Gm38079-201ENSMUST00000195603 154 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 AC138604.2-201ENSMUST00000226620 921 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Traf1P39428 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.53□□□□□ -1.04
Traf1P39428 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Traf1P39428 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.53□□□□□ -1.04
Traf1P39428 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Traf1P39428 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 CT025639.1-201ENSMUST00000223906 1375 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Gm19801-201ENSMUST00000218231 1882 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Gm13352-201ENSMUST00000117515 262 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm13744-201ENSMUST00000118953 850 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm11850-201ENSMUST00000119679 479 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 Gm22795-201ENSMUST00000157233 118 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm23762-201ENSMUST00000158348 106 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Traf1P39428 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Traf1P39428 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Gm7481-201ENSMUST00000182020 995 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm27026-201ENSMUST00000183003 892 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm6472-202ENSMUST00000187973 582 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm29369-201ENSMUST00000190674 615 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Ighv1-21-201ENSMUST00000194856 351 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.52□□□□□ -1.05
Traf1P39428 Gm44258-201ENSMUST00000204925 301 ntBASIC8.52□□□□□ -1.05
Traf1P39428 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Traf1P39428 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Traf1P39428 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Traf1P39428 Gm43398-201ENSMUST00000196584 2742 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 AC154141.1-201ENSMUST00000208403 4136 ntBASIC8.52□□□□□ -1.05
Traf1P39428 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Traf1P39428 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Traf1P39428 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Traf1P39428 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Traf1P39428 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Traf1P39428 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Gm7420-201ENSMUST00000162836 842 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Traf1P39428 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC8.51□□□□□ -1.05
Traf1P39428 Gm17965-201ENSMUST00000193904 517 ntBASIC8.51□□□□□ -1.05
Traf1P39428 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC8.51□□□□□ -1.05
Traf1P39428 Gm18995-201ENSMUST00000202981 520 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms