Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Mmp13P33435 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
Mmp13P33435 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Mmp13P33435 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Mmp13P33435 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Mmp13P33435 Gm13521-201ENSMUST00000118922 866 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm11383-201ENSMUST00000121346 807 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.4□□□□□ -1.22
Mmp13P33435 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Mmp13P33435 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.4□□□□□ -1.22
Mmp13P33435 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm5445-201ENSMUST00000180224 480 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm27972-201ENSMUST00000184720 137 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm8524-201ENSMUST00000186232 379 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm3121-201ENSMUST00000187086 406 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm37295-201ENSMUST00000192186 109 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm17965-201ENSMUST00000193904 517 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Mmp13P33435 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.4□□□□□ -1.22
Mmp13P33435 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.4□□□□□ -1.22
Mmp13P33435 Gm18765-201ENSMUST00000203166 660 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Mmp13P33435 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Mmp13P33435 AC160338.3-201ENSMUST00000214836 384 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.4□□□□□ -1.22
Mmp13P33435 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 CT010472.1-201ENSMUST00000224000 704 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.4□□□□□ -1.22
Mmp13P33435 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Mmp13P33435 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Mmp13P33435 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Mmp13P33435 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Mmp13P33435 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC7.4□□□□□ -1.23
Mmp13P33435 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
Mmp13P33435 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Mmp13P33435 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Mmp13P33435 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm43411-201ENSMUST00000196235 1579 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC7.39□□□□□ -1.23
Mmp13P33435 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm22439-201ENSMUST00000104048 132 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm24284-201ENSMUST00000104240 142 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm13282-201ENSMUST00000121577 545 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm37349-201ENSMUST00000194205 624 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm43725-201ENSMUST00000200122 369 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC7.39□□□□□ -1.23
Mmp13P33435 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.39□□□□□ -1.23
Mmp13P33435 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC7.39□□□□□ -1.23
Mmp13P33435 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Mmp13P33435 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Mmp13P33435 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.39□□□□□ -1.23
Mmp13P33435 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Mmp13P33435 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
Mmp13P33435 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Mmp13P33435 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Mmp13P33435 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Mmp13P33435 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 Gm42577-201ENSMUST00000201367 3211 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Mmp13P33435 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Mmp13P33435 Gm37530-201ENSMUST00000191759 4932 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Mmp13P33435 Gm23701-201ENSMUST00000103893 110 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.38□□□□□ -1.23
Mmp13P33435 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms