Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm16077-201ENSMUST00000121915 655 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm16305-201ENSMUST00000140747 556 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm22424-201ENSMUST00000158527 87 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm25947-201ENSMUST00000180343 110 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm8192-201ENSMUST00000182196 958 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm28665-201ENSMUST00000189269 670 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm6750-201ENSMUST00000189273 268 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm17978-201ENSMUST00000195986 769 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm44743-201ENSMUST00000209062 386 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC5.8□□□□□ -1.48
Sdc1P18828 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC5.8□□□□□ -1.48
Sdc1P18828 Gzma-202ENSMUST00000224282 996 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Sdc1P18828 AC154767.1-201ENSMUST00000224669 358 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 AC132468.1-201ENSMUST00000224706 499 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 AC121542.2-201ENSMUST00000227529 400 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm9800-201ENSMUST00000052615 336 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm8174-201ENSMUST00000064353 1001 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Sdc1P18828 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC5.8□□□□□ -1.48
Sdc1P18828 AC107763.1-201ENSMUST00000226082 1365 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Phf7-206ENSMUST00000228437 1373 ntBASIC5.8□□□□□ -1.48
Sdc1P18828 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Sdc1P18828 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm37086-201ENSMUST00000193082 3452 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm13221-201ENSMUST00000121712 430 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm15086-201ENSMUST00000143110 573 ntTSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC5.79□□□□□ -1.48
Sdc1P18828 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm22224-201ENSMUST00000157357 93 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm22311-201ENSMUST00000158006 110 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm23757-201ENSMUST00000158353 100 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm23007-201ENSMUST00000158951 177 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Sdc1P18828 Anp32e-207ENSMUST00000170125 413 ntTSL 3 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm27218-201ENSMUST00000183745 392 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm27158-201ENSMUST00000183813 238 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm28952-201ENSMUST00000189285 681 ntBASIC5.79□□□□□ -1.48
Sdc1P18828 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Sdc1P18828 Gm37481-201ENSMUST00000195176 403 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms