Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC122533.1-201ENSMUST00000225177 767 ntBASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ccdc180J3QNE4 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Col12a1-202ENSMUST00000121227 9953 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm14729-201ENSMUST00000118373 689 ntBASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm11472-201ENSMUST00000121305 556 ntBASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm8183-201ENSMUST00000183134 980 ntBASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm37669-201ENSMUST00000192184 820 ntBASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm498-207ENSMUST00000207630 1483 ntTSL 5 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc180J3QNE4 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Ank1-215ENSMUST00000173248 7100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm9144-201ENSMUST00000101625 1008 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm24790-201ENSMUST00000104285 132 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm16073-201ENSMUST00000116032 517 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm15349-201ENSMUST00000121154 204 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm11341-201ENSMUST00000122316 447 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm10364-202ENSMUST00000153034 1001 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm24176-201ENSMUST00000158928 121 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm6074-201ENSMUST00000193340 451 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm17895-201ENSMUST00000194028 874 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm4042-201ENSMUST00000216946 637 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 AC107763.1-202ENSMUST00000225021 2663 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Phxr4-202ENSMUST00000216590 1391 ntBASIC13.19□□□□□ -0.3
Ccdc180J3QNE4 Gm24228-201ENSMUST00000158829 129 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm6931-201ENSMUST00000183103 371 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm29663-201ENSMUST00000186962 853 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm2774-201ENSMUST00000213650 1165 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 AC164883.2-201ENSMUST00000227931 3815 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm22256-201ENSMUST00000102291 107 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Mir697-201ENSMUST00000102316 109 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm11553-201ENSMUST00000120682 240 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm12920-201ENSMUST00000121818 1186 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Gm10126-201ENSMUST00000221732 168 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Mir296-201ENSMUST00000083587 79 ntBASIC13.18□□□□□ -0.3
Ccdc180J3QNE4 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm5361-201ENSMUST00000211041 1498 ntBASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc180J3QNE4 D5Ertd615e-202ENSMUST00000197016 3911 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms