Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Col6a3E9PWQ3 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm22726-201ENSMUST00000158089 179 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm5611-201ENSMUST00000164523 852 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Ebf1-201ENSMUST00000081265 5981 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm8320-201ENSMUST00000177584 1762 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm8303-201ENSMUST00000178371 1762 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm38001-201ENSMUST00000192900 3761 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm37024-201ENSMUST00000192224 868 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm7838-201ENSMUST00000203221 1189 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC6.96□□□□□ -1.3
Col6a3E9PWQ3 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm25244-201ENSMUST00000178089 132 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm27350-201ENSMUST00000185109 98 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm45497-201ENSMUST00000211701 740 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 CT956049.1-201ENSMUST00000225671 763 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 AV026068-231ENSMUST00000225862 482 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm14220-201ENSMUST00000118114 449 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm11343-201ENSMUST00000120579 599 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm15242-201ENSMUST00000122459 283 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Mir3095-201ENSMUST00000175552 87 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm24957-201ENSMUST00000179604 132 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm29159-201ENSMUST00000187969 379 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Myadm-204ENSMUST00000203566 4028 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm18103-201ENSMUST00000216621 779 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm46192-201ENSMUST00000217894 326 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Casp14-202ENSMUST00000219237 2200 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Gm5229-201ENSMUST00000039375 354 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 C1qtnf7-201ENSMUST00000076939 3879 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Nutm1-201ENSMUST00000043970 3731 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Col6a3E9PWQ3 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms