Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm12710-201ENSMUST00000119011 216 ntBASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Gm13754-201ENSMUST00000120486 998 ntBASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Gm19035-202ENSMUST00000194575 959 ntBASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Gm18012-201ENSMUST00000204558 773 ntBASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Col4a6B1AVK5 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.43□□□□□ -1.22
Col4a6B1AVK5 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Mbnl2-203ENSMUST00000226800 3328 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm12540-201ENSMUST00000121938 319 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm25117-201ENSMUST00000157194 144 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Mir1953-201ENSMUST00000157866 89 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 AC073562.1-201ENSMUST00000222117 401 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Wdr37-201ENSMUST00000021572 4526 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm19210-201ENSMUST00000199562 1350 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Col4a6B1AVK5 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Myof-202ENSMUST00000172095 7094 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm22267-201ENSMUST00000104008 131 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm23748-201ENSMUST00000104227 131 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm15422-201ENSMUST00000117453 541 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm13176-201ENSMUST00000117910 477 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm13224-201ENSMUST00000119586 94 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm4992-201ENSMUST00000120256 768 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm14251-201ENSMUST00000122133 279 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm12152-201ENSMUST00000122465 684 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm4613-201ENSMUST00000165488 276 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm7426-201ENSMUST00000179046 404 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm27030-201ENSMUST00000182551 464 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm37328-201ENSMUST00000193191 640 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm3511-201ENSMUST00000199823 204 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm42673-201ENSMUST00000202676 337 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 AC154324.1-201ENSMUST00000226711 814 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Tmem161b-206ENSMUST00000225069 2414 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Gm28653-201ENSMUST00000185494 5276 ntBASIC7.41□□□□□ -1.22
Col4a6B1AVK5 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms