Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 AC123533.2-201ENSMUST00000228176 375 ntBASIC8.06□□□□□ -1.12
Scn3aA2ASI5 AC123665.3-201ENSMUST00000228735 1216 ntBASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.06□□□□□ -1.12
Scn3aA2ASI5 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Scn3aA2ASI5 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm13156-201ENSMUST00000118348 321 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm43555-201ENSMUST00000196588 310 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm30517-201ENSMUST00000197350 772 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 AC079644.2-201ENSMUST00000220581 322 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm2065-201ENSMUST00000194697 2757 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Cd300a-201ENSMUST00000045151 4633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm14466-201ENSMUST00000119028 451 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm15349-201ENSMUST00000121154 204 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm10136-201ENSMUST00000183196 435 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm44227-201ENSMUST00000203576 241 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm44943-201ENSMUST00000207254 300 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm45279-201ENSMUST00000210315 391 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Scn3aA2ASI5 AC117608.1-201ENSMUST00000225500 3418 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.05□□□□□ -1.12
Scn3aA2ASI5 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm25724-201ENSMUST00000104531 117 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm37620-201ENSMUST00000192910 501 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm37367-201ENSMUST00000191771 2602 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.04□□□□□ -1.12
Scn3aA2ASI5 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms