Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm3103-201ENSMUST00000198073 752 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm18765-201ENSMUST00000203166 660 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim3Q9R1R2 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm15665-201ENSMUST00000119116 847 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm23027-201ENSMUST00000158771 158 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm19840-201ENSMUST00000169624 882 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm26784-201ENSMUST00000181666 410 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm15013-202ENSMUST00000183728 801 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Mir6403-201ENSMUST00000185007 129 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm27458-201ENSMUST00000185108 121 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm29999-202ENSMUST00000193554 671 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm42938-201ENSMUST00000198414 1072 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC102582.1-201ENSMUST00000215376 378 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC159205.1-201ENSMUST00000225513 1099 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm37906-201ENSMUST00000192050 3035 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm26575-201ENSMUST00000181714 2232 ntBASIC6.9□□□□□ -1.3
Trim3Q9R1R2 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.9□□□□□ -1.31
Trim3Q9R1R2 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Gm36933-201ENSMUST00000194945 3071 ntBASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Trim3Q9R1R2 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.89□□□□□ -1.31
Trim3Q9R1R2 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Trim3Q9R1R2 Gm24986-201ENSMUST00000104452 132 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms