Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm37871-201ENSMUST00000194973 688 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm17967-201ENSMUST00000195319 647 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm18058-201ENSMUST00000207385 492 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm45346-201ENSMUST00000209925 1273 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 AC154296.3-201ENSMUST00000214427 712 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 AC153974.1-201ENSMUST00000219012 430 ntTSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 AC125223.1-201ENSMUST00000224004 749 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 AC122393.1-201ENSMUST00000226570 319 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 AC166574.2-201ENSMUST00000226751 381 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 AC113178.1-201ENSMUST00000227616 935 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm25739-201ENSMUST00000082886 107 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm22043-201ENSMUST00000082993 158 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Aldoart1-202ENSMUST00000179234 2050 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim39Q9ESN2 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 AC160550.2-202ENSMUST00000227812 1861 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 R3hdm1-208ENSMUST00000187900 3982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Lingo2-201ENSMUST00000065173 2910 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm23127-201ENSMUST00000104261 130 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm12393-201ENSMUST00000117084 848 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm12392-201ENSMUST00000118014 938 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm11440-201ENSMUST00000121509 527 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm14983-201ENSMUST00000121551 323 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm22793-201ENSMUST00000157227 330 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm26393-201ENSMUST00000157625 129 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Cyb5a-205ENSMUST00000163083 676 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm23145-201ENSMUST00000178912 79 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm27150-201ENSMUST00000183441 1038 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm27228-201ENSMUST00000184500 1038 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm7863-201ENSMUST00000184700 805 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm29598-201ENSMUST00000188996 588 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm38078-201ENSMUST00000192771 392 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm43013-201ENSMUST00000198216 247 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm6072-201ENSMUST00000203989 496 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm8290-201ENSMUST00000218202 477 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm8137-201ENSMUST00000218997 463 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 AC132247.1-201ENSMUST00000225930 585 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Tssk4-207ENSMUST00000228395 1273 ntAPPRIS P5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 AC118250.2-201ENSMUST00000228890 416 ntBASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Trim39Q9ESN2 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms