Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm22470-201ENSMUST00000104117 130 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm13739-201ENSMUST00000118020 530 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm13877-201ENSMUST00000120614 417 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm12692-201ENSMUST00000121092 546 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm4887-201ENSMUST00000122230 1053 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm6838-201ENSMUST00000172851 582 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm5787-201ENSMUST00000183049 1038 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm21181-201ENSMUST00000186249 330 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm20136-201ENSMUST00000207501 891 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm7239-201ENSMUST00000220981 860 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 AC154849.2-201ENSMUST00000223781 974 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 AC134869.2-201ENSMUST00000225788 421 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm44886-201ENSMUST00000209009 1304 ntTSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.22□□□□□ -1.09
Smc1aQ9CU62 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Serpina12-201ENSMUST00000043915 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Smc1aQ9CU62 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Smc1aQ9CU62 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm12601-201ENSMUST00000118994 846 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm14631-201ENSMUST00000119067 594 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm24530-201ENSMUST00000157948 288 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm23164-201ENSMUST00000175084 111 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm28980-201ENSMUST00000187877 219 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm27680-202ENSMUST00000199221 807 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm42804-201ENSMUST00000199701 178 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Ube2n-ps1-201ENSMUST00000201768 459 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm34701-201ENSMUST00000204213 849 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm46317-201ENSMUST00000221103 393 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Mir484-201ENSMUST00000093566 67 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Fbxw21-203ENSMUST00000198076 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm37163-201ENSMUST00000195439 1690 ntBASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Smc1aQ9CU62 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Smc1aQ9CU62 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms