Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Gm5436-201ENSMUST00000058103 643 ntBASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Gm20507-201ENSMUST00000163245 2860 ntTSL 2 BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Ctnna3-201ENSMUST00000075099 2688 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Cnpy1-203ENSMUST00000120068 2284 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Selenop-201ENSMUST00000082424 2013 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Rnf11-202ENSMUST00000064167 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Pcdhb7Q8CDY9 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm14273-201ENSMUST00000136315 1786 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Lrrc29-204ENSMUST00000210801 3830 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm35172-201ENSMUST00000196037 2649 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43413-201ENSMUST00000200411 1566 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 AC122357.1-201ENSMUST00000221652 1515 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm37168-201ENSMUST00000192965 1452 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm4275-205ENSMUST00000212624 1436 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Spin2c-201ENSMUST00000049999 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm6429-201ENSMUST00000117144 475 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm13454-201ENSMUST00000118166 483 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm12770-201ENSMUST00000121734 462 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm11454-201ENSMUST00000144092 714 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm16139-201ENSMUST00000160015 420 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm17085-201ENSMUST00000165425 502 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm20637-201ENSMUST00000175715 462 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm27150-201ENSMUST00000183441 1038 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm27228-201ENSMUST00000184500 1038 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm9142-201ENSMUST00000187161 955 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm28477-201ENSMUST00000188125 406 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm38068-201ENSMUST00000192546 540 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm8850-201ENSMUST00000195316 588 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm43308-201ENSMUST00000197236 373 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm44227-201ENSMUST00000203576 241 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm44023-201ENSMUST00000203710 469 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm44862-201ENSMUST00000207981 1055 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm45323-201ENSMUST00000209853 413 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm45866-201ENSMUST00000212425 326 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 CT030166.1-201ENSMUST00000222654 357 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 AC166574.2-201ENSMUST00000226751 381 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Sftpc-201ENSMUST00000022692 792 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Ackr1-201ENSMUST00000038227 1153 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Gm16410-201ENSMUST00000094550 774 ntBASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Olfr1510-202ENSMUST00000215928 1934 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Pcdhb7Q8CDY9 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 D7Bwg0826e-201ENSMUST00000208484 3795 ntBASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Pcdhb7Q8CDY9 Elavl2-203ENSMUST00000107109 1591 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Pcdhb7Q8CDY9 Elavl2-205ENSMUST00000107111 1552 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Pcdhb7Q8CDY9 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Pcdhb7Q8CDY9 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms